Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015847798.1_cds_XP_016510187.1_23051
CDS Infomation

[gene=LOC107827548] [db_xref=GeneID:107827548] [protein=calnexin homolog 1-like] [protein_id=XP_016510187.1] [location=join(9333..9425,9550..9619,10862..11985,12083..12154,12236..12355,12489..12629)] [gbkey=CDS]
Sequence

ATGGAAGAGCGGAATCGAAGGATTTGGACGCAATATTCATTGTTGCTATTGGCCGGTTGC
TTCGTCTCTCAACTATATGCCTCTTCAGATGTGAAATTTTACGAGTCATTCGATAAGGCA
TTTGATGGGCGATGGATTGTGTCTGAGAAAGAGGAATATAATGGTGTGTGGAAACATGCC
AAGAGTGAAGGGCATGATGACTATGGGCTTCTTGTGAGTGAGAAGGCAAGGAAATATGCT
ATTGTCAAGGAGCTCAATGATGTTGTCGACCTCAAAGATGGAACTGTGGTTCTTCAATAT
GAAGTTCGCCTCCAGGATGGGCTTGAATGTGGTGGTGCTTATCTTAAATACCTCCGGCCC
CAGGAGGCAGGTTGGATTCCCAAGGAATTCAACAACGAGTCTCCCTATACTATAATGTTT
GGACCAGATAAATGTGGAGCCACAAATAAGGTTCACTTCATCTTGAAACACAAGAATCCT
AAGAGTGGGGAGTACATCGAGCACCACCTTAAGTTTCCACCATCTGTACCTTCTGACAAA
CTAACCCATGTCTACACTGCTGTGCTGAAACCAGACAATGAGTTGCTGATCTTGATTGAC
GGGGAAGAGAAAAAGAAGGCAAACTTCCTTTCAGATGATGATTTTGAGCCACCTCTCATT
CCTGCAGAGACCATTCCAGATCCAGAAGATAAGAAGCCCGAGGACTGGGATGAGAGGGCG
AAAATTCCAGACCCAGATGCTAAGAAACCAGATGATTGGGACGAGGATGCACCAATGGAA
ATTGAAGATGAAGATGCTGAGAAGCCTGAGGGATGGTTGGATGACGAGCCTGAAGAGATC
GATGATCCTGAGGCAACAAAGCCTGAAGATTGGGTTGATGAGGAAGATGGTGAATGGGAG
GCTCCAAAAATTGATAACCCGAAGTGTGCAGAAGGCCCTGGATGTGGGGAGTGGAAAAGA
CCAATGAAGAGTAATCCAGCTTACAAGGGAAAATGGCATGCTCCACTGATTGACAATCCC
AATTACAAGGGTATTTGGAAGCCAAGGGATATTCCAAATCCTAACTACTTCAAACTCGAC
AGGCCCAATTTTGAGCCTATTGCAGCAATTGGCATTGAAATCTGGACAATGCAAGATGGT
ATATTATTTGACAATATCTTGATAGCAAGTGATGAGAAAGTTGCAGAATCATACAGGAAT
ACTGCATGGAAGCCCAAGTTTGATGCAGAAAAAGAGAAACAGAAGGCTGAGGAAGTAGCA
AGCTCTGGTGGGCTCAAAGGATTCCAGAAAGTGGTATTTGATCTTCTCTACAAGGTGGCT
GACATCCCCTTGTTGGGTGAACACAAGTCTAAAGTACTGGATCTTCTTGAGAAAGCCGAG
ACACAGCCTAATCTCACAATTGGTGTTGTCATTTCAATCATAATTGTCATTTTCACAGTT
CTCTTGAAGCTCATCTTCGGCGGGAAGAAACAGCAACCTGCAAGAGCTACTGCAGAACCT
AAGAAAAGTGATGGTGCTGAGGCATCAACTTCTAACAGCCAAGGAGCTACAGAGGAGAAA
GAAGAGCAGAATGAGGATGCTGCCGCTGCTCCTCGTAGGAGGACTAGACGTGATAATTAG

Peptide Sequence

PEP ID

XP_016510187.1
PEP Infomation

PREDICTED: calnexin homolog 1-like [Nicotiana tabacum]
Sequence

MEERNRRIWTQYSLLLLAGCFVSQLYASSDVKFYESFDKAFDGRWIVSEKEEYNGVWKHA
KSEGHDDYGLLVSEKARKYAIVKELNDVVDLKDGTVVLQYEVRLQDGLECGGAYLKYLRP
QEAGWIPKEFNNESPYTIMFGPDKCGATNKVHFILKHKNPKSGEYIEHHLKFPPSVPSDK
LTHVYTAVLKPDNELLILIDGEEKKKANFLSDDDFEPPLIPAETIPDPEDKKPEDWDERA
KIPDPDAKKPDDWDEDAPMEIEDEDAEKPEGWLDDEPEEIDDPEATKPEDWVDEEDGEWE
APKIDNPKCAEGPGCGEWKRPMKSNPAYKGKWHAPLIDNPNYKGIWKPRDIPNPNYFKLD
RPNFEPIAAIGIEIWTMQDGILFDNILIASDEKVAESYRNTAWKPKFDAEKEKQKAEEVA
SSGGLKGFQKVVFDLLYKVADIPLLGEHKSKVLDLLEKAETQPNLTIGVVISIIIVIFTV
LLKLIFGGKKQQPARATAEPKKSDGAEASTSNSQGATEEKEEQNEDAAAAPRRRTRRDN

Transcript Sequence

Gene sequence data has not been registered.